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Karatas, S.; Mikalsen, J.; Steinum, T. M.; Taksdal, T.; Bordevik, M.; Colquhoun, D. J.
<?xml version='1.0' encoding='UTF-8'?> <record xmlns="http://www.loc.gov/MARC21/slim"> <leader>00000nam##2200000uu#4500</leader> <datafield tag="245" ind1=" " ind2=" "> <subfield code="a">Real time PCR detection of Piscirickettsia salmonis from formalin-fixed paraffin-embedded tissues</subfield> </datafield> <datafield tag="909" ind1="C" ind2="4"> <subfield code="p">JOURNAL OF FISH DISEASES</subfield> <subfield code="v">31</subfield> <subfield code="n">10</subfield> <subfield code="c">747-753</subfield> </datafield> <controlfield tag="001">38847</controlfield> <datafield tag="980" ind1=" " ind2=" "> <subfield code="a">user-tubitak-destekli-proje-yayinlari</subfield> </datafield> <datafield tag="520" ind1=" " ind2=" "> <subfield code="a">Piscirickettsia salmonis is the causative agent of piscirickettsiosis, a transmissible disease of salmonid fish. Diagnosis of piscirickettsiosis has traditionally been based upon identification of typical pathological changes by histological investigation, with confirmation by immunohistochemistry on formalin-fixed, paraffin-embedded tissues. However, implementation of more rapid confirmatory techniques, preferably with higher levels of sensitivity and possibilities for quantification, is desirable. A real-time polymerase chain reaction (PCR) assay was designed for specific detection of P. salmonis and tested on samples extracted from formalin-fixed paraffin-embedded material. Construction of a PCR-target mimic allowed determination of detection limits, linearity of the real-time PCR and quantitative detection of P. salmonis. The present study demonstrates the capability of the described real time PCR assay for detection of P. salmonis from paraffin-embedded material with a high degree of sensitivity and specificity. Implementation of this assay constitutes an important development for a rapid and secure diagnosis of piscirickettsiosis.</subfield> </datafield> <datafield tag="650" ind1="1" ind2="7"> <subfield code="2">opendefinition.org</subfield> <subfield code="a">cc-by</subfield> </datafield> <datafield tag="700" ind1=" " ind2=" "> <subfield code="u">Natl Vet Inst, N-0106 Oslo, Norway</subfield> <subfield code="a">Mikalsen, J.</subfield> </datafield> <datafield tag="700" ind1=" " ind2=" "> <subfield code="u">Natl Vet Inst, N-0106 Oslo, Norway</subfield> <subfield code="a">Steinum, T. M.</subfield> </datafield> <datafield tag="700" ind1=" " ind2=" "> <subfield code="u">Natl Vet Inst, N-0106 Oslo, Norway</subfield> <subfield code="a">Taksdal, T.</subfield> </datafield> <datafield tag="700" ind1=" " ind2=" "> <subfield code="u">Pharmaq AS, Oslo, Norway</subfield> <subfield code="a">Bordevik, M.</subfield> </datafield> <datafield tag="700" ind1=" " ind2=" "> <subfield code="u">Natl Vet Inst, N-0106 Oslo, Norway</subfield> <subfield code="a">Colquhoun, D. J.</subfield> </datafield> <datafield tag="980" ind1=" " ind2=" "> <subfield code="b">article</subfield> <subfield code="a">publication</subfield> </datafield> <datafield tag="542" ind1=" " ind2=" "> <subfield code="l">open</subfield> </datafield> <datafield tag="100" ind1=" " ind2=" "> <subfield code="u">Natl Vet Inst, N-0106 Oslo, Norway</subfield> <subfield code="a">Karatas, S.</subfield> </datafield> <datafield tag="260" ind1=" " ind2=" "> <subfield code="c">2008-01-01</subfield> </datafield> <controlfield tag="005">20210315200729.0</controlfield> <datafield tag="909" ind1="C" ind2="O"> <subfield code="o">oai:zenodo.org:38847</subfield> <subfield code="p">user-tubitak-destekli-proje-yayinlari</subfield> </datafield> <datafield tag="856" ind1="4" ind2=" "> <subfield code="z">md5:3a67732f564829c56923700a63032de3</subfield> <subfield code="s">231</subfield> <subfield code="u">https://aperta.ulakbim.gov.trrecord/38847/files/bib-5eca4ae7-6cba-4916-a43c-6c9ebe218767.txt</subfield> </datafield> <datafield tag="540" ind1=" " ind2=" "> <subfield code="u">http://www.opendefinition.org/licenses/cc-by</subfield> <subfield code="a">Creative Commons Attribution</subfield> </datafield> <datafield tag="024" ind1=" " ind2=" "> <subfield code="a">10.1111/j.1365-2761.2008.00948.x</subfield> <subfield code="2">doi</subfield> </datafield> </record>
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