1 Ocak 2018 Dergi makalesi Açık Erişim

Ross, Caroline; Nizami, Bilal; Glenister, Michael; Amamuddy, Olivier Sheik; Atilgan, Ali Rana; Atilgan, Canan; Bishop, Ozlem Tastan

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  <identifier identifierType="URL">https://aperta.ulakbim.gov.tr/record/36087</identifier>
  <creators>
    <creator>
      <creatorName>Ross, Caroline</creatorName>
      <givenName>Caroline</givenName>
      <familyName>Ross</familyName>
      <affiliation>Rhodes Univ, Dept Biochem &amp; Microbiol, Res Unit Bioinformat RUBi, ZA-6140 Grahamstown, South Africa</affiliation>
    </creator>
    <creator>
      <creatorName>Nizami, Bilal</creatorName>
      <givenName>Bilal</givenName>
      <familyName>Nizami</familyName>
    </creator>
    <creator>
      <creatorName>Glenister, Michael</creatorName>
      <givenName>Michael</givenName>
      <familyName>Glenister</familyName>
      <affiliation>Rhodes Univ, Dept Biochem &amp; Microbiol, Res Unit Bioinformat RUBi, ZA-6140 Grahamstown, South Africa</affiliation>
    </creator>
    <creator>
      <creatorName>Amamuddy, Olivier Sheik</creatorName>
      <givenName>Olivier Sheik</givenName>
      <familyName>Amamuddy</familyName>
      <affiliation>Rhodes Univ, Dept Biochem &amp; Microbiol, Res Unit Bioinformat RUBi, ZA-6140 Grahamstown, South Africa</affiliation>
    </creator>
    <creator>
      <creatorName>Atilgan, Ali Rana</creatorName>
      <givenName>Ali Rana</givenName>
      <familyName>Atilgan</familyName>
      <affiliation>Sabanci Univ, Fac Engn &amp; Nat Sci, TR-34956 Tuzla, Turkey</affiliation>
    </creator>
    <creator>
      <creatorName>Atilgan, Canan</creatorName>
      <givenName>Canan</givenName>
      <familyName>Atilgan</familyName>
      <affiliation>Sabanci Univ, Fac Engn &amp; Nat Sci, TR-34956 Tuzla, Turkey</affiliation>
    </creator>
    <creator>
      <creatorName>Bishop, Ozlem Tastan</creatorName>
      <givenName>Ozlem Tastan</givenName>
      <familyName>Bishop</familyName>
      <affiliation>Rhodes Univ, Dept Biochem &amp; Microbiol, Res Unit Bioinformat RUBi, ZA-6140 Grahamstown, South Africa</affiliation>
    </creator>
  </creators>
  <titles>
    <title>Mode-Task: Large-Scale Protein Motion Tools</title>
  </titles>
  <publisher>Aperta</publisher>
  <publicationYear>2018</publicationYear>
  <dates>
    <date dateType="Issued">2018-01-01</date>
  </dates>
  <resourceType resourceTypeGeneral="Text">Journal article</resourceType>
  <alternateIdentifiers>
    <alternateIdentifier alternateIdentifierType="url">https://aperta.ulakbim.gov.tr/record/36087</alternateIdentifier>
  </alternateIdentifiers>
  <relatedIdentifiers>
    <relatedIdentifier relatedIdentifierType="DOI" relationType="IsIdenticalTo">10.1093/bioinformatics/bty427</relatedIdentifier>
  </relatedIdentifiers>
  <rightsList>
    <rights rightsURI="http://www.opendefinition.org/licenses/cc-by">Creative Commons Attribution</rights>
    <rights rightsURI="info:eu-repo/semantics/openAccess">Open Access</rights>
  </rightsList>
  <descriptions>
    <description descriptionType="Abstract">MODE-TASK, a novel and versatile software suite, comprises Principal Component Analysis, Multidimensional Scaling, and t-Distributed Stochastic Neighbor Embedding techniques using Molecular Dynamics trajectories. MODE-TASK also includes a Normal Mode Analysis tool based on Anisotropic Network Model so as to provide a variety of ways to analyse and compare large-scale motions of protein complexes for which long MD simulations are prohibitive. Beside the command line function, a GUI has been developed as a PyMOL plugin.</description>
  </descriptions>
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