1 Ocak 2020 Dergi makalesi Açık Erişim

Eroglu, Gozde Busra; Inan, Cihan; Nalcacioglu, Remziye; Demirbag, Zihni

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  <identifier identifierType="URL">https://aperta.ulakbim.gov.tr/record/5269</identifier>
  <creators>
    <creator>
      <creatorName>Eroglu, Gozde Busra</creatorName>
      <givenName>Gozde Busra</givenName>
      <familyName>Eroglu</familyName>
      <affiliation>Karadeniz Tech Univ, Fac Sci, Dept Biol, Trabzon, Turkey</affiliation>
    </creator>
    <creator>
      <creatorName>Inan, Cihan</creatorName>
      <givenName>Cihan</givenName>
      <familyName>Inan</familyName>
      <affiliation>Karadeniz Tech Univ, Fac Sci, Dept Mol Biol &amp; Genet, Trabzon, Turkey</affiliation>
    </creator>
    <creator>
      <creatorName>Nalcacioglu, Remziye</creatorName>
      <givenName>Remziye</givenName>
      <familyName>Nalcacioglu</familyName>
      <affiliation>Karadeniz Tech Univ, Fac Sci, Dept Biol, Trabzon, Turkey</affiliation>
    </creator>
    <creator>
      <creatorName>Demirbag, Zihni</creatorName>
      <givenName>Zihni</givenName>
      <familyName>Demirbag</familyName>
      <affiliation>Karadeniz Tech Univ, Fac Sci, Dept Biol, Trabzon, Turkey</affiliation>
    </creator>
  </creators>
  <titles>
    <title>Genome Sequence Analysis Of A Helicoverpa Armigera Single Nucleopolyhedrovirus (Hearnpv-Tr) Isolated Fromheliothis Peltigera In Turkey</title>
  </titles>
  <publisher>Aperta</publisher>
  <publicationYear>2020</publicationYear>
  <dates>
    <date dateType="Issued">2020-01-01</date>
  </dates>
  <resourceType resourceTypeGeneral="Text">Journal article</resourceType>
  <alternateIdentifiers>
    <alternateIdentifier alternateIdentifierType="url">https://aperta.ulakbim.gov.tr/record/5269</alternateIdentifier>
  </alternateIdentifiers>
  <relatedIdentifiers>
    <relatedIdentifier relatedIdentifierType="DOI" relationType="IsIdenticalTo">10.1371/journal.pone.0234635</relatedIdentifier>
  </relatedIdentifiers>
  <rightsList>
    <rights rightsURI="http://www.opendefinition.org/licenses/cc-by">Creative Commons Attribution</rights>
    <rights rightsURI="info:eu-repo/semantics/openAccess">Open Access</rights>
  </rightsList>
  <descriptions>
    <description descriptionType="Abstract">The entire genome of Helicoverpa armigera single nucleopolyhedrovirus (HearNPV-TR) was sequenced, and compared to genomes of other existing isolates. HearNPV-TR genome is 130.691 base pairs with a 38.9% G+C content and has 137 open reading frames (ORFs) of &amp;gt;= 150 nucleotides. Five homologous repeated sequences (hrs) and two baculovirus repeated ORFs (bro-a andbro-b) were identified. Phylogenetic analysis showed that HearNPV-TR is closer to HaSNPV-C1, HaSNPV-G4, HaSNPV-AU and HasNPV. However, there are significant differences inhr3,hr5 regions and inbro-a gene. Pairwise Kimura-2 parameter analysis of 38 core genes sequences of HearNPV-TR and other Helicoverpa NPVs showed that the genetic distances for these sequences were below 0.015 substitutions/site. Genomic differences as revealed by restriction profiles indicated thathr3,hr5regions andbro-a gene may play a role in the virulence of HearNPV-TR.</description>
  </descriptions>
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