Dergi makalesi Açık Erişim
Serilmez, Murat; Abuelrub, Anwar; Erol, İsmail; Durdagı, Serdar
{ "conceptdoi": "10.48623/aperta.285983", "conceptrecid": "285983", "created": "2025-06-03T11:02:35.899612+00:00", "doi": "10.48623/aperta.285984", "files": [ { "bucket": "c7bcdbcc-71c1-43b8-beab-2c45cd3abff8", "checksum": "md5:7db218b4d47c514e16e47fbc29609411", "key": "Supplementary Data revised 03062025.docx", "links": { "self": "https://aperta.ulakbim.gov.tr/api/files/c7bcdbcc-71c1-43b8-beab-2c45cd3abff8/Supplementary%20Data%20revised%2003062025.docx" }, "size": 1024997, "type": "docx" } ], "id": 285984, "links": { "badge": "https://aperta.ulakbim.gov.tr/badge/doi/10.48623/aperta.285984.svg", "bucket": "https://aperta.ulakbim.gov.tr/api/files/c7bcdbcc-71c1-43b8-beab-2c45cd3abff8", "conceptbadge": "https://aperta.ulakbim.gov.tr/badge/doi/10.48623/aperta.285983.svg", "conceptdoi": "https://doi.org/10.48623/aperta.285983", "doi": "https://doi.org/10.48623/aperta.285984", "html": "https://aperta.ulakbim.gov.tr/record/285984", "latest": "https://aperta.ulakbim.gov.tr/api/records/285984", "latest_html": "https://aperta.ulakbim.gov.tr/record/285984" }, "metadata": { "access_right": "open", "access_right_category": "success", "creators": [ { "affiliation": "\u0130stanbul \u00dcniversitesi", "name": "Serilmez, Murat" }, { "affiliation": "Bah\u00e7e\u015fehir \u00dcniversitesi", "name": "Abuelrub, Anwar" }, { "affiliation": "Bah\u00e7e\u015fehir \u00dcniversitesi", "name": "Erol, \u0130smail" }, { "affiliation": "Bah\u00e7e\u015fehir \u00dcniversitesi", "name": "Durdag\u0131, Serdar" } ], "description": "<p><strong>Background/Aim:</strong> The COVID-19 pandemic caused by SARS-CoV-2 necessitated rapid development of effective therapeutics, prompting this study to identify potential inhibitors targeting key viral proteins: RNA-dependent RNA polymerase (RdRp), main protease (Mpro), transmembrane serine protease 2 (TMPRSS2), and angiotensin-converting enzyme 2 (ACE2).</p>\n\n<p><strong>Methods:</strong> We employed covalent docking and molecular dynamics simulations to screen FDA-approved compounds against these targets using diverse covalent reaction mechanisms. Top-ranking compounds underwent further evaluation through molecular dynamics simulations to assess binding stability and conformational dynamics.</p>\n\n<p><strong>Results:</strong> Several promising drug repurposing candidates were identified: Bremelanotide, Lanreotide, histerlin, and Leuprolide as potential RdRp protein inhibitors; Azlocilin, Cefiderocol, and Sultamicillin for Mpro inhibition; Tenapanor, Isavuconazonium, and Ivosidenib targeting TMPRSS2; and Cefiderocol, Cefoperazone, and Ceftolozane as potential ACE2 inhibitors..</p>\n\n<p> <strong>Conclusion:</strong> This study provides valuable insights into repurposing existing drugs as potential COVID-19 therapeutics by targeting crucial viral proteins. However, further experimental validation and clinical studies are necessary to confirm the efficacy and safety of these compounds before consideration for clinical application.</p>", "doi": "10.48623/aperta.285984", "has_grant": true, "keywords": [ "Covid-19", "covalent docking", "Molecular dynamic simulation", "molecular mechanics-generalised born surface area" ], "license": { "id": "cc-by-nc-4.0" }, "publication_date": "2025-04-07", "related_identifiers": [ { "identifier": "10.48623/aperta.285983", "relation": "isVersionOf", "scheme": "doi" } ], "relations": { "version": [ { "count": 1, "index": 0, "is_last": true, "last_child": { "pid_type": "recid", "pid_value": "285984" }, "parent": { "pid_type": "recid", "pid_value": "285983" } } ] }, "resource_type": { "subtype": "article", "title": "Dergi makalesi", "type": "publication" }, "science_branches": [ "Sa\u011fl\u0131k Bilimleri > T\u0131p > Temel T\u0131p Bilimleri > Biyokimya" ], "title": "FDA-approved drugs as potential covalent inhibitors of key SARS-CoV-2 proteins: An in silico approach", "tubitak_grants": [ { "program": "DIGER", "project_number": "118C494", "workgroup": "SBAG" } ] }, "owners": [ 2836 ], "revision": 1, "stats": { "downloads": 0.0, "unique_downloads": 0.0, "unique_views": 0.0, "version_downloads": 0.0, "version_unique_downloads": 0.0, "version_unique_views": 0.0, "version_views": 0.0, "version_volume": 0.0, "views": 0.0, "volume": 0.0 }, "updated": "2025-06-03T11:02:36.051584+00:00" }
Tüm sürümler | Bu sürüm | |
---|---|---|
Görüntülenme | 0 | 0 |
İndirme | 0 | 0 |
Veri hacmi | 0 Bytes | 0 Bytes |
Tekil görüntülenme | 0 | 0 |
Tekil indirme | 0 | 0 |