Yayınlanmış 1 Ocak 2018
| Sürüm v1
Dergi makalesi
Açık
MODE-TASK: large-scale protein motion tools
Oluşturanlar
- 1. Rhodes Univ, Dept Biochem & Microbiol, Res Unit Bioinformat RUBi, ZA-6140 Grahamstown, South Africa
- 2. Sabanci Univ, Fac Engn & Nat Sci, TR-34956 Tuzla, Turkey
Açıklama
MODE-TASK, a novel and versatile software suite, comprises Principal Component Analysis, Multidimensional Scaling, and t-Distributed Stochastic Neighbor Embedding techniques using Molecular Dynamics trajectories. MODE-TASK also includes a Normal Mode Analysis tool based on Anisotropic Network Model so as to provide a variety of ways to analyse and compare large-scale motions of protein complexes for which long MD simulations are prohibitive. Beside the command line function, a GUI has been developed as a PyMOL plugin.
Dosyalar
bib-32f6a3ce-0fad-4af0-8028-f9983bca046c.txt
Dosyalar
(176 Bytes)
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