Published January 1, 2023 | Version v1
Journal article Open

Label free electrochemical DNA biosensor for COVID-19 diagnosis

  • 1. Chulalongkorn Univ, Fac Sci, Electrochem & Opt Spect Ctr Excellence EOSCE, Dept Chem, 254 Phayathai Rd, Bangkok 10330, Thailand
  • 2. Chulalongkorn Univ, Met & Mat Sci Res Inst, Soi Chula 12 Phayathai Rd, Bangkok 10330, Thailand
  • 3. Yildiz Tech Univ, Fac Chem Met Engn, Dept Bioengn, TR-34220 Istanbul, Turkiye
  • 4. Tokyo Inst Technol, Dept Life Sci & Technol, Nagatsuta 4259 B-57, Yokohama 2268501, Japan
  • 5. Mahidol Univ, Fac Med, Dept Pathol, Ramathibodi Hosp, Bangkok, Thailand
  • 6. Mahidol Univ, Fac Med, Dept Med, Ramathibodi Hosp, Bangkok, Thailand
  • 7. Chulalongkorn Univ, Fac Sci, Dept Chem, Organ Synth Res Unit, Bangkok 10330, Thailand

Description

The COVID-19 pandemic has significantly increased the development of the development of point-of-care (POC) diagnostic tools because they can serve as useful tools for detecting and controlling spread of the disease. Most current methods require sophisticated laboratory instruments and specialists to provide reliable, cost-effective, specific, and sensitive POC testing for COVID-19 diagnosis. Here, a smartphone-assisted Sensit Smart potentiostat (PalmSens) was integrated with a paper-based electrochemical sensor to detect severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). A disposable paper-based device was fabricated, and the working electrode directly modified with a pyrrolidinyl peptide nucleic acid (acpcPNA) as the biological recognition element to capture the target complementary DNA (cDNA). In the presence of the target cDNA, hybridization with acpcPNA probe blocks the redox conversion of a redox reporter, leading to a decrease in electrochemical response correlating to SARS-CoV-2 concentration. Under optimal conditions, a linear range from 0.1 to 200 nM and a detection limit of 1.0 pM were obtained. The PNA-based electrochemical paper-based analytical device (PNA-based ePAD) offers high specificity toward SARS-CoV-2 N gene because of the highly selective PNA-DNA binding. The developed sensor was used for amplification-free SARS-CoV-2 detection in 10 nasopharyngeal swab samples (7 SARS-CoV-2 positive and 3 SARS-CoV-2 negative), giving a 100% agreement result with RT-PCR.

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