Published January 1, 2013 | Version v1
Journal article Open

Testing robustness of relative complexity measure method constructing robust phylogenetic trees for Galanthus L. Using the relative complexity measure

  • 1. Abant Izzet Baysal Univ, Dept Biol, TR-14280 Bolu, Turkey
  • 2. Bogazici Univ, Dept Mol Biol & Genet, TR-34342 Istanbul, Turkey
  • 3. Sabanci Univ, TR-34956 Istanbul, Turkey
  • 4. Istanbul Univ, Dept Bot, TR-34460 Istanbul, Turkey

Description

Background: Most phylogeny analysis methods based on molecular sequences use multiple alignment where the quality of the alignment, which is dependent on the alignment parameters, determines the accuracy of the resulting trees. Different parameter combinations chosen for the multiple alignment may result in different phylogenies. A new non-alignment based approach, Relative Complexity Measure (RCM), has been introduced to tackle this problem and proven to work in fungi and mitochondrial DNA.

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