Dergi makalesi Açık Erişim

Utilization of Herbaria in Ecological Studies: Biodiversity and Landscape Monitoring

   Çelekli, Abuzer; Zariç, Özgür Eren

Herbaria collections—systematic repositories where plant specimens are preserved—are transitioning from traditional taxonomic tools into fundamental resources in ecological research. This comprehensive review summarizes multidisciplinary applications of herbaria collections in monitoring biodiversity and conservation. The review evaluates the historical and contemporary importance of herbaria specimens in documenting changes in species distribution, population dynamics, and community composition, elucidating their roles in understanding the effects of climate change and human intervention. Moreover, it examines how herbaria collections contribute to large- scale temporal and spatial biodiversity analyses, predictive modeling, and conservation planning in the context of advancements in digitization and molecular techniques. This review underscores the integration of herbaria data into mainstream ecological research and policy decisions, advocating for modernizing herbarium techniques and the innovative use of collections. It aims to foster a deeper understanding of complex environmental systems and inform targeted conservation strategies by revealing the multifaceted uses and expectations of herbaria in ecological studies. Thus, it contributes to the broader scientific discussion on sustainable biodiversity management and highlights the relationship between herbaria and ecological studies.

Dosyalar (2.5 MB)
Dosya adı Boyutu
Herbarium Celeki & Zaric.pdf
md5:de879b45f1d8a08f932aeebd8c3bc4b0 		2.5 MB İndir
  • Albani Rocchetti, G., Armstrong, C. G., Abeli, T., Orsenigo, S., Jasper, C., Joly, S., Bruneau, A., Zytaruk, M., & Vamosi, J. C. (2021). Reversing extinction trends: new uses of (old) herbarium specimens to accelerate conservation action on threatened species. New Phytologist, 230(2), 433–450. https://doi. org/10.1111/nph.17133
  • Amici, V., Geri, F., Bonini, I., & Rocchini, D. (2014). Ecological niche modelling with herbarium data: A framework to improve Natura 2000 habitat monitoring. Applied Ecology and Environmental Research, 12(3), 645–659.
  • Belhumeur, P. N., Chen, D., Feiner, S., Jacobs, D. W., Kress, W. J., Ling, H., Lopez, I., Ramamoorthi, R., Sheorey, S., White, S., & Zhang, L. (2008). Searching the world's Herbaria: A system for visual identification of plant species. Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 5305 LNCS(PART 4), 116–129. https://doi.org/10.1007/978-3-540- 88693-8_9
  • Besnard, G., Christin, P. A., Malé, P. J. G., Lhuillier, E., Lauzeral, C., Coissac, E., & Vorontsova, M. S. (2014). From museums to genomics: Old herbarium specimens shed light on a C3 to C4 transition. Journal of Experimental Botany, 65(22), 6711–6721. https://doi.org/10.1093/jxb/eru395
  • Bieker, V. C., & Martin, M. D. (2018). Implications and future prospects for evolutionary analyses of DNA in historical herbarium collections. Botany Letters, 165(3–4), 409–418. https://doi.org/10.1080/23818107.2018.1458651
  • Bogart, R. (2008). Strategic communications and its critical role in bird habitat conservation:Bogart, R. (2008). Strategic communications and its critical role in bird habitat conservation: understanding the social-ecological landscape. Tundra to Tropics: Connecting Birds,. Tundra to Tropics: Connecting Birds, Habitats, and People, 2009(April), 441–452. http:// www.partnersinflight.org/pubs/McAllenProc/articles/PIF09_ Education_Communication/Bogart_PIF09.pdf
  • Brock, P. M., Döring, H., & Bidartondo, M. I. (2009). How to know unknown fungi: The role of a herbarium. New Phytologist, 181(3), 719–724. https://doi.org/10.1111/j.1469- 8137.2008.02703.x
  • Cazalis, V., Santini, L., Lucas, P. M., González-Suárez, M., Hoffmann, M., Benítez-López, A., Pacifici, M., Schipper, A. M., Böhm, M., Zizka, A., Clausnitzer, V., Meyer, C., Jung, M., Butchart, S. H. M., Cardoso, P., Mancini, G., Reşit Akçakaya, H., Young, B. E., Patoine, G., & Di Marco, M. (2023). Prioritizing the reassessment of data deficient species on the IUCN Red List. Conservation Biology, n/a(n/a), e14139. https://doi.org/10.1111/cobi.14139
  • Davis, C. C. (2023). The herbarium of the future. Trends in Ecology and Evolution, 38(5), 412–423. https://doi.org/10.1016/j. tree.2022.11.015
  • DeSalle, R., & Amato, G. (2004). The expansion of conservation genetics. Nature Reviews Genetics, 5(9), 702–712. https://doi. org/10.1038/nrg1425
  • European Environment Agency. (2021). CORINE Land Cover - User Manual. Copernicus Land Monitoring Service, 1.0(European Environment Agency/European Topic Centre Urban Land and Soil), 128.
  • Friedman, J., Yaniv, Z., Dafni, A., & Palewitch, D. (1986). A preliminary classification of the healing potential of medicinal plants, based on a rational analysis of an ethnopharmacological field survey among Bedouins in the Negev Desert, Israel. Journal of Ethnopharmacology, 16(2–3), 275–287. https://doi. org/10.1016/0378-8741(86)90094-2
  • Gallagher, R. V., Hughes, L., & Leishman, M. R. (2009). Phenological trends among Australian alpine species: Using herbarium records to identify climate-change indicators. Australian Journal of Botany, 57(1), 1–9. https://doi.org/10.1071/BT08051
  • Greve, M., Lykke, A. M., Fagg, C. W., Gereau, R. E., Lewis, G. P., Marchant, R., Marshall, A. R., Ndayishimiye, J., Bogaert, J., & Svenning, J. C. (2016). Realising the potential of herbarium records for conservation biology. South African Journal of Botany, 105, 317–323. https://doi.org/10.1016/j. sajb.2016.03.017
  • Heberling, J. M. (2022). Herbaria As Big Data Sources of Plant Traits. International Journal of Plant Sciences, 183(2), 87–118. https:// doi.org/10.1086/717623
  • Henderson, W. G. (2011). George Maxwell: Bushman and naturalist. Early Days: Journal of the Royal Western Australian Historical Society, 13(5), 626–648.
  • Huettmann, F., & Ickert-Bond, S. M. (2017). On open access, data mining and plant conservation in the Circumpolar North with an online data example of the Herbarium, University of Alaska Museum of the North. Arctic Science, 4(4), 433–470.
  • Hulme, P. E. (2020). Plant invasions in New Zealand: global lessons in prevention, eradication and control. Biological Invasions, 22(5), 1539–1562. https://doi.org/10.1007/s10530-020-02224-6
  • James, S. A., Soltis, P. S., Belbin, L., Chapman, A. D., Nelson, G., Paul, D. L., & Collins, M. (2018). Herbarium data: Global biodiversity and societal botanical needs for novel research: Global. Applications in Plant Sciences, 6(2), e1024. https://doi. org/10.1002/aps3.1024
  • Jones, C. A., & Daehler, C. C. (2018). Herbarium specimens can reveal impacts of climate change on plant phenology; a review of methods and applications. PeerJ, 2018(4), e4576. https://doi. org/10.7717/peerj.4576
  • Lang, P. L. M., Willems, F. M., Scheepens, J. F., Burbano, H. A., & Bossdorf, O. (2019). Using herbaria to study global environmental change. New Phytologist, 221(1), 110–122. https://doi.org/10.1111/nph.15401
  • Lavoie, C. (2013). Biological collections in an ever changing world: Herbaria as tools for biogeographical and environmental studies. Perspectives in Plant Ecology, Evolution and Systematics, 15(1), 68–76. https://doi.org/10.1016/j.ppees.2012.10.002
  • Lima, D. F., Mello, J. H. F., Lopes, I. T., Forzza, R. C., Goldenberg, R., & Freitas, L. (2021). Phenological responses to climate change based on a hundred years of herbarium collections of tropical Melastomataceae. PLoS ONE, 16(5), e0251360. https://doi. org/10.1371/journal.pone.0251360
  • Moss, B. (1983). The ecology of algae. Journal of Applied Ecology, 20(1), 343–344. https://doi.org/10.2307/2403401
  • Nualart, N., Ibáñez, N., Soriano, I., & López-Pujol, J. (2017). Assessing the Relevance of Herbarium Collections as Tools for Conservation Biology. Botanical Review, 83(3), 303–325. https:// doi.org/10.1007/s12229-017-9188-z
  • Papini, A., Mosti, S., & Santosuosso, U. (2013). Tracking the origin of the invading Caulerpa (Caulerpales, Chlorophyta) with geographic profiling, a criminological technique for a killer alga. Biological Invasions, 15, 1613–1621.
  • Rawal, D. S., Kasel, S., Keatley, M. R., & Nitschke, C. R. (2015). Herbarium records identify sensitivity of flowering phenology of eucalypts to climate: Implications for species response to climate change. Austral Ecology, 40(2), 117–125. https://doi. org/10.1111/aec.12183
  • Rivers, M. C., Bachman, S. P., Meagher, T. R., Lughadha, E. N., & Brummitt, N. A. (2010). Subpopulations, locations and fragmentation: Applying IUCN red list criteria to herbarium specimen data. Biodiversity and Conservation, 19(7), 2071– 2085. https://doi.org/10.1007/s10531-010-9826-9
  • Sanderson, M. A., Skinner, R. H., Barker, D. J., Edwards, G. R., Tracy, B. F., & Wedin, D. A. (2004). Plant species diversity and management of temperate forage and grazing land ecosystems. Crop Science, 44(4), 1132–1144. https://doi.org/10.2135/ cropsci2004.1132
  • Santosuosso, U., & Papini, A. (2018). Geo-Profiling: beyond the Current Limits. A Preliminary Study of Mathematical Methods to Improve the Monitoring of Invasive Species. Russian Journal of Ecology, 49(4), 362–370. https://doi.org/10.1134/ S1067413618040112
  • Schmidt, M., Kreft, H., Thiombiano, A., & Zizka, G. (2005). Herbarium collections and field data-based plant diversity maps for Burkina Faso. Diversity and Distributions, 11(6), 509–516. https://doi. org/10.1111/j.1366-9516.2005.00185.x
  • Soltis, P. S. (2017). Digitization of herbaria enables novel research. American Journal of Botany, 104(9), 1281–1284. https://doi. org/10.3732/ajb.1700281
  • Stevenson, M. D., Rossmo, D. K., Knell, R. J., & Le Comber, S. C. (2012). Geographic profiling as a novel spatial tool for targeting the control of invasive species. Ecography, 35(8), 704–715. https://doi.org/10.1111/j.1600-0587.2011.07292.x
  • Thiers, B. M., Tulig, M. C., & Watson, K. A. (2016). Digitization of The New York Botanical Garden Herbarium. Brittonia, 68(3), 324– 333. https://doi.org/10.1007/s12228-016-9423-7
  • Ward, M., & Howald, A. (2005). the California Native Plant Society'S Rare Plant Program: 37 Years of Plant Science. Fremontia, 17.
  • Wu, S. H., Rejmánek, M., Grotkopp, E., & DiTomaso, J. M. (2005). Herbarium records, actual distribution, and critical attributes of invasive plants: Genus Crotalaria in Taiwan. Taxon, 54(1), 133– 138. https://doi.org/10.2307/25065311
  • Zariç, Ö. E., Yeşildağ, İ., Yaygır, S., & Çelekli, A. (2022). Removal of Harmful Dyes Using Some Algae. 3rd International Congress on Plant Biology, 173. https://doi.org/10.5281/zenodo.8190776
  • Çelekli, A., & Zariç, Ö. E. (2023). Hydrobiology and ecology in the context of climate change: the future of aquatic ecosystems. 6th International Eurasian Conference on Biological and Chemical Sciences, 539-545. https://doi.org/10.5281/zenodo.10021473
  • Çelekli, A., Yaygır, S., & Zariç, Ö. E. (2023). A review of climate change-induced migration. Acta Biologica Turcica, 36(2), A3:1- 11. https://doi.org/10.5281/zenodo.8190755
  • Çiftçi, A., Mollman, R., Kaleli, B., Çapar, A., & Erol, O. (2023). Teaching Old Collections New Tricks: Initial Findings of the ISTF Herbarium Digitization Project*. Herbarium Turcicum, 0(1), 26–33. https:// doi.org/10.26650/ht.2023.1246170
253
195
görüntülenme
indirilme
Görüntülenme 253
İndirme 195
Veri hacmi 479.4 MB
Tekil görüntülenme 212
Tekil indirme 176

Kayıt Bilgileri

Yayınlanma tarihi:
25/12/2023
Bilim dalları:
Temel Bilimler > Yaşam Bilimleri
Anahtar kelimeler:
Biodiversity Conservation Planning Ecology Herbarium Monitoring
Yayınlandığı yer:
Herbarium Turcicum:.
İlgili tanımlayıcılar:
Bu çalışma ile aynıdır:
10.26650/HT.2023.1345916
Lisans:
Creative Commons Attribution-NonCommercial

Alıntı yap

Paylaş

Dışa aktar